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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42675047_42676140_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42675047 - 42676140

Intron Length:

1094

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTCA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTCCAT

U12 Branch Point Sequence:

TTCTAGGTTATT

Flanking Amino Acid:

SQTTIHVVPTAPTTVNVTHR

Intron Amino Acid Position:

909

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

77.7

33.5

Major BPS

68.5

0.46

1.2

78.5

35.1

Major PPT

91.6

0.94

0.6

84.9

29.9

Minor 5ss

-0.4

2.5

59.7

44.7

Minor BPS

38.7

-0.8

2.8

64.25

46.3

Associated Gene:

Gene:

ATF7IP

Ensembl Gene ID:

ENSAPLG00000002466

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041408

42670287 - 42718505

48219

ENSAPLT00000002500

42670287 - 42726317

56031