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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42676297_42678899_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42676297 - 42678899

Intron Length:

2603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTAAAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTCTCTGTAACT

Flanking Amino Acid:

LDDEDDGSSQESKKQNQTPA

Intron Amino Acid Position:

857

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.4

26.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

71.4

0.48

68.3

41.2

Minor 5ss

29.7

-2.3

3.3

37.8

Minor BPS

0.64

87.23

Associated Gene:

Gene:

ATF7IP

Ensembl Gene ID:

ENSAPLG00000002466

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041408

42670287 - 42718505

48219

ENSAPLT00000002500

42670287 - 42726317

56031