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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42695720_42697154_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42695720 - 42697154

Intron Length:

1435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCGAAAAGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

CTTTGATCAATT

Flanking Amino Acid:

NKRTAEGTTQLKHEETSSEN

Intron Amino Acid Position:

783

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.8

38.3

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

62.5

0.28

1.1

57.4

41.4

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

48.5

-0

2.2

73.15

Associated Gene:

Gene:

ATF7IP

Ensembl Gene ID:

ENSAPLG00000002466

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041408

42670287 - 42718505

48219