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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42695807_42697154_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42695807 - 42697154

Intron Length:

1348

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CCGCACTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

TATGTATTACTC

Flanking Amino Acid:

NKRTAEGTTQLSEQKVVRCV

Intron Amino Acid Position:

831

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.8

38.3

Major BPS

72.5

0.56

1.2

63.4

Major PPT

67.4

0.39

0.9

59.8

35.2

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

47.2

-0.2

1.9

59.79

39.8

Associated Gene:

Gene:

ATF7IP

Ensembl Gene ID:

ENSAPLG00000002466

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031250

42694277 - 42726317

32041

ENSAPLT00000019911

42694277 - 42726317

32041