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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42699476_42700989_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42699476 - 42700989

Intron Length:

1514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTATGTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGTAT

U12 Branch Point Sequence:

TTTTTTTTTTTT

Flanking Amino Acid:

TTTFQASLSTVPASTFVAPQ

Intron Amino Acid Position:

596

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

0.8

80.3

26.9

Major BPS

56.3

0.16

1.5

57.4

49.1

Major PPT

0.4

62.7

43.3

Minor 5ss

28.3

-2.5

2.8

33.7

41.9

Minor BPS

43.9

-0.3

3.5

78.47

38.5

Associated Gene:

Gene:

ATF7IP

Ensembl Gene ID:

ENSAPLG00000002466

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019911

42694277 - 42726317

32041

ENSAPLT00000002500

42670287 - 42726317

56031

ENSAPLT00000041408

42670287 - 42718505

48219

ENSAPLT00000031250

42694277 - 42726317

32041