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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42701079_42701613_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42701079 - 42701613

Intron Length:

535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTCTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTGAA

U12 Branch Point Sequence:

GCTAACTGAAGC

Flanking Amino Acid:

DTVSTTNTTYRNAGTVRQML

Intron Amino Acid Position:

566

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

74.5

37.6

Major BPS

65.6

0.39

0.9

55.4

32.7

Major PPT

84.4

0.77

0.7

80.2

25.3

Minor 5ss

39.2

-1.2

2.9

49.4

46.6

Minor BPS

45.4

-0.3

1.9

43.1

Associated Gene:

Gene:

ATF7IP

Ensembl Gene ID:

ENSAPLG00000002466

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019911

42694277 - 42726317

32041

ENSAPLT00000002500

42670287 - 42726317

56031

ENSAPLT00000041408

42670287 - 42718505

48219

ENSAPLT00000031250

42694277 - 42726317

32041