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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42718506_42726180_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42718506 - 42726180

Intron Length:

7675

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTGGA

5'SS Class:

major

3'SS Sequence:

TCTGTTTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TCTTACTGATCT

Flanking Amino Acid:

LPGPTLETGLQVKMDGTDEP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

62.5

38.1

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

78.1

0.63

82.6

32.9

Minor 5ss

28.8

-2.4

3.1

36.6

41.7

Minor BPS

55.6

0.26

1.9

78.01

43.9

Associated Gene:

Gene:

ATF7IP

Ensembl Gene ID:

ENSAPLG00000002466

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031250

42694277 - 42726317

32041

ENSAPLT00000019911

42694277 - 42726317

32041

ENSAPLT00000002500

42670287 - 42726317

56031