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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42837659_42838070_F

Intron Information:

Intron Rank:

126213

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

42837659 - 42838070

Intron Length:

412

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCG|GCAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCATGTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

TTTGCTTCATGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.79

1.2

79.7

35.4

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

59.5

0.21

1.2

64.8

40.4

Minor 5ss

23.2

-3.1

3.9

35.3

41.4

Minor BPS

47.1

-0.1

2.1

71.47

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017992

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037325

42837465 - 42838925

1461