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Intron Name: Anas_platyrhynchos_platyrhynchos_1_4289398_4293521_F

Intron Information:

Intron Rank:

147226

Intron Class:

major

Intron Phase:

Intron Coordinates:

4289398 - 4293521

Intron Length:

4124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTCAA

5'SS Class:

strong_major

3'SS Sequence:

ATTCTTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TCATCATTACTA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

71.9

34.7

Major BPS

84.4

0.85

34.5

Major PPT

85.9

0.81

0.7

84.6

29.4

Minor 5ss

34.2

-1.8

2.8

40.2

45.9

Minor BPS

53.2

0.1

1.9

65.11

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029293

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031349

4289287 - 4295929

6643