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Intron Name: Anas_platyrhynchos_platyrhynchos_1_4290401_4293521_F

Intron Information:

Intron Rank:

147230

Intron Class:

major

Intron Phase:

Intron Coordinates:

4290401 - 4293521

Intron Length:

3121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGAAAA

5'SS Class:

major

3'SS Sequence:

ATTCTTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TCATCATTACTA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.2

76.9

33.7

Major BPS

84.4

0.85

34.5

Major PPT

85.9

0.81

0.7

84.6

29.4

Minor 5ss

28.2

-2.5

2.7

31.6

42.2

Minor BPS

53.2

0.1

1.9

65.11

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029293

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040881

4290366 - 4295754

5389