Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_429236_430737_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

429236 - 430737

Intron Length:

1502

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTGGG

5'SS Class:

major

3'SS Sequence:

AATACTGTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTCTTTATAATA

Flanking Amino Acid:

NFNIDADDDSPNASLFEACC

Intron Amino Acid Position:

612

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.1

44.9

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

71.1

0.47

66.3

44.2

Minor 5ss

34.1

-1.8

3.2

45.3

Minor BPS

60.6

0.33

1.5

71.1

35.7

Associated Gene:

Gene:

PPP6R2

Ensembl Gene ID:

ENSAPLG00000003046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048408

381682 - 447727

66046

ENSAPLT00000003179

381682 - 447727

66046