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Intron Name: Anas_platyrhynchos_platyrhynchos_1_42933507_42981662_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42933507 - 42981662

Intron Length:

48156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTATTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TGGCTTTCTATT

Flanking Amino Acid:

GGSSMIMADKDESSMFFQFG

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

77.4

33.8

Major BPS

73.8

0.59

1.3

72.8

Major PPT

81.4

0.71

0.8

74.2

35.2

Minor 5ss

38.9

-1.2

2.9

49.9

46.3

Minor BPS

43.8

-0.4

1.7

57.4

40.1

Associated Gene:

Gene:

GRIN2B

Ensembl Gene ID:

ENSAPLG00000002441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002456

42933096 - 43095618

162523