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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43169909_43177156_F

Intron Information:

Intron Rank:

146603

Intron Class:

major

Intron Phase:

Intron Coordinates:

43169909 - 43177156

Intron Length:

7248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

AAGAATTCAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.2

38.5

Major BPS

74.2

0.6

0.9

75.7

Major PPT

87.4

0.84

0.7

84.9

Minor 5ss

34.7

-1.7

2.8

35.3

41.4

Minor BPS

42.4

-0.5

1.7

45.71

35.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028987

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035561

43169026 - 43177446

8421