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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43217049_43217661_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43217049 - 43217661

Intron Length:

613

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

TTCCTTCCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

CATTTTCCAACT

Flanking Amino Acid:

YITGAIMLVCWLCILIGASI

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

75.1

40.8

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

81.1

0.7

76.1

26.1

Minor 5ss

42.3

-0.9

2.9

61.4

42.8

Minor BPS

49.1

0.01

1.9

69.52

41.5

Associated Gene:

Gene:

EMP1

Ensembl Gene ID:

ENSAPLG00000021727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028823

43216173 - 43226640

10468

ENSAPLT00000038949

43215885 - 43218833

2949