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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43217803_43217906_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43217803 - 43217906

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTGTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

GAGTCCTGACCT

Flanking Amino Acid:

RQLAVSSNEAASLKAAQAFM

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

77.5

32.9

Major BPS

68.9

0.47

59.2

39.1

Major PPT

77.6

0.62

0.9

71.5

38.4

Minor 5ss

30.1

-2.3

2.6

28.4

Minor BPS

55.7

0.26

1.8

71.13

45.1

Associated Gene:

Gene:

EMP1

Ensembl Gene ID:

ENSAPLG00000021727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038949

43215885 - 43218833

2949

ENSAPLT00000028823

43216173 - 43226640

10468