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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43218010_43218653_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43218010 - 43218653

Intron Length:

644

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

CATCCGATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

CGCCCCCCAACA

Flanking Amino Acid:

IMLFVSTIANVWMVGTTATG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

80.1

34.8

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

71.1

0.47

66.1

39.2

Minor 5ss

37.5

-1.4

2.8

41.7

Minor BPS

46.3

-0.2

1.9

54.87

43.3

Associated Gene:

Gene:

EMP1

Ensembl Gene ID:

ENSAPLG00000021727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038949

43215885 - 43218833

2949

ENSAPLT00000028823

43216173 - 43226640

10468