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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43218773_43226433_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43218773 - 43226433

Intron Length:

7661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGATCA

5'SS Class:

major

3'SS Sequence:

TGTTCTCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

CTTCCCTTCATC

Flanking Amino Acid:

GQRVHGSCSLKLSALATPPR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

65.1

35.6

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

82.8

0.74

0.8

74.1

36.6

Minor 5ss

39.5

-1.2

45.4

43.3

Minor BPS

62.1

0.36

1.8

71.44

40.3

Associated Gene:

Gene:

EMP1

Ensembl Gene ID:

ENSAPLG00000021727

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028823

43216173 - 43226640

10468