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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43271169_43271394_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

43271169 - 43271394

Intron Length:

226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACAA

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGTCTTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTGAA

U12 Branch Point Sequence:

GAAGCTATATCT

Flanking Amino Acid:

QAQTGDGKKKVVVIDGKSGI

Intron Amino Acid Position:

456

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

70.2

35.7

Major BPS

0.3

34.1

Major PPT

0.16

1.7

68.5

37.4

Minor 5ss

30.6

-2.2

3.1

38.6

46.4

Minor BPS

45.1

-0.2

1.9

59.77

43.2

Associated Gene:

Gene:

FAM234B

Ensembl Gene ID:

ENSAPLG00000015659

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016373

43266860 - 43287649

20790