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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43337064_43350380_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43337064 - 43350380

Intron Length:

13317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGAAAA

5'SS Class:

major

3'SS Sequence:

CCTCTTTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAC

U12 Branch Point Sequence:

GCTTTATTACCT

Flanking Amino Acid:

EALGVRKKVAEVTNSLPERP

Intron Amino Acid Position:

537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

33.3

Major BPS

74.8

0.62

1.1

40.5

Major PPT

83.6

0.76

0.7

79.2

26.5

Minor 5ss

25.9

-2.8

30.2

43.1

Minor BPS

0.2

1.9

73.22

43.6

Associated Gene:

Gene:

DDX47

Ensembl Gene ID:

ENSAPLG00000015324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028086

43335056 - 43358036

22981