Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_43350692_43351200_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43350692 - 43351200

Intron Length:

509

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTCTT

5'SS Class:

major

3'SS Sequence:

TGTCTTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATGAAT

U12 Branch Point Sequence:

ATTCAGGGAAAT

Flanking Amino Acid:

RSGKSITFVTQYDVELFQRI

Intron Amino Acid Position:

463

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

75.9

39.9

Major BPS

0.2

1.3

67.7

36.5

Major PPT

85.3

0.8

0.7

84.1

30.8

Minor 5ss

42.4

-0.8

3.1

39.9

Minor BPS

35.9

-0.9

2.5

59.41

Associated Gene:

Gene:

DDX47

Ensembl Gene ID:

ENSAPLG00000015324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028086

43335056 - 43358036

22981

ENSAPLT00000016011

43330095 - 43358036

27942