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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43351272_43352658_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43351272 - 43352658

Intron Length:

1387

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

AAATTGCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAA

U12 Branch Point Sequence:

TATTGCTTATCA

Flanking Amino Acid:

INFDIPTHSKDYIHRVGRTA

Intron Amino Acid Position:

440

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.6

1.07

0.7

30.2

Major BPS

0.72

80.3

31.7

Major PPT

71.7

0.49

66.8

43.9

Minor 5ss

39.5

-1.2

2.8

48.7

47.5

Minor BPS

62.1

0.38

76.55

40.6

Associated Gene:

Gene:

DDX47

Ensembl Gene ID:

ENSAPLG00000015324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028086

43335056 - 43358036

22981

ENSAPLT00000016011

43330095 - 43358036

27942