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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43352797_43353113_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43352797 - 43353113

Intron Length:

317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGGCA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TGTTCTCTCATT

Flanking Amino Acid:

AIPLHGQMSQNKRLGSLNKF

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

68.4

36.4

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

87.6

0.85

0.7

80.2

31.8

Minor 5ss

35.6

-1.6

3.5

47.4

48.2

Minor BPS

52.3

0.15

77.07

39.9

Associated Gene:

Gene:

DDX47

Ensembl Gene ID:

ENSAPLG00000015324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028086

43335056 - 43358036

22981

ENSAPLT00000016011

43330095 - 43358036

27942