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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43353619_43353748_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43353619 - 43353748

Intron Length:

130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

TTGATCTTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

ATTAACTTACTT

Flanking Amino Acid:

FLFSATMTKQVQKLQRAALK

Intron Amino Acid Position:

306

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.8

73.9

29.7

Major BPS

81.9

0.79

0.8

81.9

Major PPT

65.9

0.36

1.1

41.7

Minor 5ss

25.3

-2.8

3.1

30.4

42.9

Minor BPS

56.1

0.27

1.8

76.24

40.3

Associated Gene:

Gene:

DDX47

Ensembl Gene ID:

ENSAPLG00000015324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016011

43330095 - 43358036

27942

ENSAPLT00000028086

43335056 - 43358036

22981