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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43353821_43354336_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43353821 - 43354336

Intron Length:

516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAACA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGTAC

U12 Branch Point Sequence:

CTGTTCTGTACA

Flanking Amino Acid:

RILNMDFETEVDKILKVIPR

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

74.4

Major BPS

49.6

-0

1.4

51.3

43.9

Major PPT

88.6

0.87

0.6

84.3

23.6

Minor 5ss

32.4

-2

3.1

40.9

45.1

Minor BPS

50.4

0.01

1.8

63.15

43.1

Associated Gene:

Gene:

DDX47

Ensembl Gene ID:

ENSAPLG00000015324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028086

43335056 - 43358036

22981

ENSAPLT00000016011

43330095 - 43358036

27942