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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43354456_43354971_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43354456 - 43354971

Intron Length:

516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

ATTCTCTTGGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TCATTCTTAACT

Flanking Amino Acid:

ALAKKPHIIIATPGRLVDHL

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

75.9

35.2

Major BPS

87.6

0.93

0.9

89.3

Major PPT

72.7

0.51

0.9

70.1

35.8

Minor 5ss

33.7

-1.9

2.9

Minor BPS

82.1

1.09

1.1

88.33

36.7

Associated Gene:

Gene:

DDX47

Ensembl Gene ID:

ENSAPLG00000015324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028086

43335056 - 43358036

22981

ENSAPLT00000016011

43330095 - 43358036

27942