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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43355044_43355581_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43355044 - 43355581

Intron Length:

538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

CTAAACTGAAAG

Flanking Amino Acid:

ALGSSIGVHSAVIVGGIDTM

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

77.9

36.8

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

80.5

0.69

0.9

36.8

Minor 5ss

36.2

-1.6

2.7

42.7

38.4

Minor BPS

45.2

-0.5

1.8

48.81

43.6

Associated Gene:

Gene:

DDX47

Ensembl Gene ID:

ENSAPLG00000015324

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028086

43335056 - 43358036

22981

ENSAPLT00000016011

43330095 - 43358036

27942