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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43445379_43448070_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
43445379 - 43448070

Intron Length:
2692

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTGCAT

5'SS Class:
major

3'SS Sequence:
TTTTGATGCCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAT

U12 Branch Point Sequence:
TTTATTTTGATG

Flanking Amino Acid:
FSKYHCQLLEDARRYGVQIS

Intron Amino Acid Position:
238

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.8
0.47
1.1
62.6
43.3

Major BPS
96.4
1.15
0.6
85.7
34.9

Major PPT
69.5
0.44
1
62.6
43.3

Minor 5ss
31.4
-2.1
3.6
47.4
48

Minor BPS
61
0.2
1.3
66.02
36.3

Associated Gene:

Gene:
ART4

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

43445222 - 43448797
3576