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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43447228_43448070_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
43447228 - 43448070

Intron Length:
843

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTGCAT

5'SS Class:
major

3'SS Sequence:
CACTTTTTTTCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCTTCAC

U12 Branch Point Sequence:
GCTCTCTTCACT

Flanking Amino Acid:
FSKYHCQLLEASRIKNSGST

Intron Amino Acid Position:
266

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.8
0.47
1.1
62.6
43.3

Major BPS
77.5
0.68
1
79.6
33

Major PPT
85.8
0.81
0.8
83.9
30.7

Minor 5ss
31.4
-2.1
3.6
47.4
48

Minor BPS
58.4
0.35
1.8
73.56
43.3

Associated Gene:

Gene:
ART4

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

43446136 - 43450984
4849

43446136 - 43450790
4655