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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43549182_43550465_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43549182 - 43550465

Intron Length:

1284

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGGACC

5'SS Class:

major

3'SS Sequence:

CGCTTTCTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTAAT

U12 Branch Point Sequence:

GCTTTCTTACAG

Flanking Amino Acid:

QTDSVCADLFPR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

71.6

38.1

Major BPS

0.47

1.2

69.9

35.3

Major PPT

81.8

0.72

0.8

75.5

33.1

Minor 5ss

29.9

-2.3

2.9

35.9

40.6

Minor BPS

-0.1

1.8

56.62

44.8

Associated Gene:

Gene:

AGBL3

Ensembl Gene ID:

ENSAPLG00000003396

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003456

43549175 - 43556818

7644