About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_43593747_43595875_R

Intron Information:

Intron Rank:
7
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
43593747 - 43595875
Intron Length:
2129

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTACTGGGC
5'SS Class:
major
3'SS Sequence:
TTTCTTCCTGCAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
ATTTCAC
U12 Branch Point Sequence:
GTATATTTCACA
Flanking Amino Acid:
RELLSKGTFQGQSAEKKTDI
Intron Amino Acid Position:
356

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
68
0.42
1.1
56.9
42.1
Major BPS
81.3
0.78
0.8
83.4
26.1
Major PPT
89.8
0.89
0.6
85.3
22.1
Minor 5ss
28.6
-2.5
3.6
41.7
45
Minor BPS
51.3
0.03
1.9
65.94
40.2

Associated Gene:

Gene:
WDR91
Ensembl Gene ID:
ENSAPLG00000002770
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000002839
43587278 - 43603678
16401