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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43596488_43597198_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
43596488 - 43597198

Intron Length:
711

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCT|GTGAGTGCC

5'SS Class:
major

3'SS Sequence:
GTTTATTTTTCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTTTCAT

U12 Branch Point Sequence:
GTTTGTTTATTT

Flanking Amino Acid:
ANMDRLGDSELDMTCSQRST

Intron Amino Acid Position:
243

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.5
0.46
1.1
62.6
36.1

Major BPS
87.6
0.93
0.9
89.3
26

Major PPT
87.4
0.84
0.8
84.8
35.4

Minor 5ss
31.4
-2.1
3.2
45.9
42.3

Minor BPS
54.6
0.22
2
76.04
41.4

Associated Gene:

Gene:
WDR91

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

43587278 - 43603678
16401