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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_4359885_4373994_F

Intron Information:

Intron Rank:
146334
Intron Class:
major
Intron Phase:
Intron Coordinates:
4359885 - 4373994
Intron Length:
14110

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTGCAAAGT
5'SS Class:
major
3'SS Sequence:
CTTATGATTGCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTATGAT
U12 Branch Point Sequence:
TATTGTTTACCT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
68.9
0.45
1
65
40.7
Major BPS
84.6
0.86
1
74
41.2
Major PPT
76.8
0.6
1
69.9
40.1
Minor 5ss
28
-2.5
3.2
40.5
45.3
Minor BPS
59
0.36
2
80.6
41.6

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000028842
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000041745
4350267 - 4374991
24725