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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43604147_43605521_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43604147 - 43605521

Intron Length:

1375

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

CTGCTGACAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATGAC

U12 Branch Point Sequence:

TTTCTGCTGACA

Flanking Amino Acid:

EGMVQTRTFAESFSLEEGNP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

0.9

72.9

31.2

Major BPS

65.9

0.4

1.1

57.5

39.1

Major PPT

61.4

0.26

55.1

Minor 5ss

26.8

-2.7

3.3

42.5

Minor BPS

46.7

-0.2

2.3

68.3

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002652

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002667

43603858 - 43611022

7165