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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43628852_43629182_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

43628852 - 43629182

Intron Length:

331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTACGTTTG

5'SS Class:

major

3'SS Sequence:

CTGTGATGGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

TGTGCCCTAACC

Flanking Amino Acid:

SPVYLFQIFPVLLGLSLSWL

Intron Amino Acid Position:

275

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.65

1.1

70.2

42.8

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

58.4

0.19

1.2

54.1

44.9

Minor 5ss

43.2

-0.7

3.1

58.3

46.2

Minor BPS

64.7

0.44

1.8

76.29

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029402

43621924 - 43638179

16256

ENSAPLT00000029074

43621924 - 43638179

16256

ENSAPLT00000002388

43621924 - 43641422

19499