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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43629304_43631610_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43629304 - 43631610

Intron Length:

2307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TTTTGTCTCATG

Flanking Amino Acid:

DAGQHWGIAFMTIFFIVLFS

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

78.2

36.4

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

76.8

0.6

0.7

68.5

31.8

Minor 5ss

41.2

-1

3.1

58.3

39.3

Minor BPS

43.8

-0.6

2.4

59.17

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029402

43621924 - 43638179

16256

ENSAPLT00000029074

43621924 - 43638179

16256

ENSAPLT00000002388

43621924 - 43641422

19499