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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43638030_43641342_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43638030 - 43641342

Intron Length:

3313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTTTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

CTGTGGCTAATG

Flanking Amino Acid:

LNGLDNPSFVGEDGSHHCSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

70.5

41.3

Major BPS

67.7

0.44

38.9

Major PPT

78.3

0.64

72.6

42.4

Minor 5ss

32.5

-2

38.1

40.9

Minor BPS

39.5

-0.9

2.5

47.05

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002381

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002388

43621924 - 43641422

19499