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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43664672_43679235_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43664672 - 43679235

Intron Length:

14564

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

GTAAATCTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATCTTTCATT

Flanking Amino Acid:

STGLGGIPISDNSSSVESLN

Intron Amino Acid Position:

592

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.6

32.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

65.1

0.34

54.6

45.2

Minor 5ss

30.6

-2.2

3.4

39.4

46.5

Minor BPS

67.8

0.64

1.7

84.32

36.9

Associated Gene:

Gene:

CNOT4

Ensembl Gene ID:

ENSAPLG00000016441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017160

43663400 - 43703438

40039