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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43687883_43690853_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43687883 - 43690853

Intron Length:

2971

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATAAT

5'SS Class:

strong_major

3'SS Sequence:

GTCTCTCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

CTAGTGTCAATT

Flanking Amino Acid:

AASFTKEEMQAGKHQEYEQK

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

89.4

23.3

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

78.5

0.64

0.8

73.4

31.6

Minor 5ss

36.8

-1.5

2.9

50.6

45.9

Minor BPS

43.4

-0.4

2.2

59.82

44.4

Associated Gene:

Gene:

CNOT4

Ensembl Gene ID:

ENSAPLG00000016441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017160

43663400 - 43703438

40039