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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43690980_43692238_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43690980 - 43692238

Intron Length:

1259

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGTAATG

5'SS Class:

major

3'SS Sequence:

TCTTTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

CTTAATTTAGCT

Flanking Amino Acid:

NVVVDGRTLKASLGTTKYCS

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.1

64.4

41.5

Major BPS

78.2

0.7

77.9

32.1

Major PPT

93.1

0.97

0.6

92.3

Minor 5ss

30.3

-2.3

3.2

39.5

Minor BPS

53.1

0.18

1.8

73.56

43.3

Associated Gene:

Gene:

CNOT4

Ensembl Gene ID:

ENSAPLG00000016441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017160

43663400 - 43703438

40039