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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43695754_43703194_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43695754 - 43703194

Intron Length:

7441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATATC

5'SS Class:

strong_major

3'SS Sequence:

TTGTTATATCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTGTTCTTAATT

Flanking Amino Acid:

ENGLCPACRKPYPEDPAVYK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

87.7

26.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

74.2

0.54

67.5

Minor 5ss

39.6

-1.2

2.9

43.3

Minor BPS

83.4

1.13

91.18

32.6

Associated Gene:

Gene:

CNOT4

Ensembl Gene ID:

ENSAPLG00000016441

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017160

43663400 - 43703438

40039