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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43751837_43755876_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43751837 - 43755876

Intron Length:

4040

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGCGGA

5'SS Class:

major

3'SS Sequence:

TTTAATCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATC

Flanking Amino Acid:

MAAPLAVNSAASLWGPYKD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.3

43.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.7

0.78

0.8

81.6

35.6

Minor 5ss

35.3

-1.7

3.3

38.1

46.8

Minor BPS

81.7

0.97

0.9

85.33

Associated Gene:

Gene:

NUP205

Ensembl Gene ID:

ENSAPLG00000016163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029191

43751809 - 43800702

48894

ENSAPLT00000016922

43751809 - 43801391

49583