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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43761604_43762386_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43761604 - 43762386

Intron Length:

783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTAC

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTGTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

CGTTTGTGATTT

Flanking Amino Acid:

RGISQLSDVTALAEFTEADE

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.88

0.9

80.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

77.2

0.61

69.2

46.1

Minor 5ss

39.8

-1.1

2.9

45.2

Minor BPS

42.5

-0.4

2.2

60.55

43.7

Associated Gene:

Gene:

NUP205

Ensembl Gene ID:

ENSAPLG00000016163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029191

43751809 - 43800702

48894

ENSAPLT00000016922

43751809 - 43801391

49583