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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43766483_43767523_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43766483 - 43767523

Intron Length:

1041

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTATCTAC

5'SS Class:

major

3'SS Sequence:

TTATTTGTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTTTTAAAC

Flanking Amino Acid:

VAHQRPPQRQVVLSKFVRQM

Intron Amino Acid Position:

492

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.2

0.41

1.2

63.3

37.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

80.3

0.68

0.9

73.7

41.5

Minor 5ss

40.6

-1.1

2.8

45.6

Minor BPS

76.4

0.81

1.2

82.98

29.8

Associated Gene:

Gene:

NUP205

Ensembl Gene ID:

ENSAPLG00000016163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029191

43751809 - 43800702

48894

ENSAPLT00000016922

43751809 - 43801391

49583