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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43767675_43768461_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43767675 - 43768461

Intron Length:

787

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

GTCATTTTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTTTTGTCATTT

Flanking Amino Acid:

SLLKVNGSSHAENIQGTGGS

Intron Amino Acid Position:

542

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.7

29.9

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

0.61

0.9

69.2

41.7

Minor 5ss

32.9

-1.9

2.9

37.3

41.2

Minor BPS

47.1

-0.1

2.4

75.31

42.2

Associated Gene:

Gene:

NUP205

Ensembl Gene ID:

ENSAPLG00000016163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029191

43751809 - 43800702

48894

ENSAPLT00000016922

43751809 - 43801391

49583