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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43768668_43769948_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43768668 - 43769948

Intron Length:

1281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTAAG

5'SS Class:

strong_major

3'SS Sequence:

CTGAACTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TTACGCTGAACT

Flanking Amino Acid:

LQLTTVIVNWSENARLALCE

Intron Amino Acid Position:

611

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.9

77.9

38.6

Major BPS

81.9

0.79

0.8

81.9

Major PPT

69.9

0.45

62.1

39.4

Minor 5ss

34.6

-1.7

2.7

34.2

41.4

Minor BPS

0.36

1.9

79.76

41.5

Associated Gene:

Gene:

NUP205

Ensembl Gene ID:

ENSAPLG00000016163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029191

43751809 - 43800702

48894

ENSAPLT00000016922

43751809 - 43801391

49583