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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43770132_43771713_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43770132 - 43771713

Intron Length:

1582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTTTTG

5'SS Class:

major

3'SS Sequence:

TTATGTTTTGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTCTCTTTATGT

Flanking Amino Acid:

SLWQSLEYTQILQTVRSPGQ

Intron Amino Acid Position:

672

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

73.3

38.2

Major BPS

83.9

0.84

73.9

41.3

Major PPT

74.3

0.55

1.1

75.4

38.4

Minor 5ss

2.4

66.9

44.3

Minor BPS

60.1

0.4

1.9

79.06

43.7

Associated Gene:

Gene:

NUP205

Ensembl Gene ID:

ENSAPLG00000016163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029191

43751809 - 43800702

48894

ENSAPLT00000016922

43751809 - 43801391

49583