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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43771765_43772362_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

43771765 - 43772362

Intron Length:

598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTCGGGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTGTTTTTAATC

Flanking Amino Acid:

PGQRQAIGIEVELNEIESRC

Intron Amino Acid Position:

689

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.5

1.02

0.7

25.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

55.8

0.13

1.2

59.4

Minor 5ss

36.4

-1.5

3.6

55.7

48.5

Minor BPS

0.54

1.2

68.78

Associated Gene:

Gene:

NUP205

Ensembl Gene ID:

ENSAPLG00000016163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016922

43751809 - 43801391

49583

ENSAPLT00000029191

43751809 - 43800702

48894