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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43775928_43776794_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43775928 - 43776794

Intron Length:

867

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGTATTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ATTTCATTACAA

Flanking Amino Acid:

KKADHVVNIARYLYHGNSNP

Intron Amino Acid Position:

901

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

76.8

31.8

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

74.3

0.55

1.1

74.6

39.1

Minor 5ss

39.1

-1.2

50.2

46.2

Minor BPS

55.5

0.17

72.59

38.8

Associated Gene:

Gene:

NUP205

Ensembl Gene ID:

ENSAPLG00000016163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029191

43751809 - 43800702

48894

ENSAPLT00000016922

43751809 - 43801391

49583