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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43776916_43777432_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43776916 - 43777432

Intron Length:

517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGAATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ATCCCCTTCATT

Flanking Amino Acid:

KLVGDFTHDQSISQKLMAGF

Intron Amino Acid Position:

942

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.7

29.5

Major BPS

100

1.24

0.5

100

Major PPT

0.43

62.3

42.4

Minor 5ss

-1.8

3.1

44.6

43.4

Minor BPS

60.5

0.41

1.8

75.58

41.5

Associated Gene:

Gene:

NUP205

Ensembl Gene ID:

ENSAPLG00000016163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029191

43751809 - 43800702

48894

ENSAPLT00000016922

43751809 - 43801391

49583