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Intron Name: Anas_platyrhynchos_platyrhynchos_1_43778066_43780207_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

43778066 - 43780207

Intron Length:

2142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAAGA

5'SS Class:

strong_major

3'SS Sequence:

CTGTATTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATTAC

U12 Branch Point Sequence:

ACTTCTGTATTT

Flanking Amino Acid:

PVSTTNLQDPGVLGCPRTCL

Intron Amino Acid Position:

1024

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

73.4

37.3

Major BPS

58.2

0.21

49.8

34.7

Major PPT

70.6

0.46

1.1

71.2

38.4

Minor 5ss

38.9

-1.2

2.8

49.3

46.5

Minor BPS

48.2

-0

2.2

69.31

42.7

Associated Gene:

Gene:

NUP205

Ensembl Gene ID:

ENSAPLG00000016163

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029191

43751809 - 43800702

48894

ENSAPLT00000016922

43751809 - 43801391

49583